p-value: | 1e-5 |
log p-value: | -1.296e+01 |
Information Content per bp: | 1.858 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.99% |
Number of Background Sequences with motif | 37.2 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 57.9 +/- 17.1bp |
Average Position of motif in Background | 58.5 +/- 24.5bp |
Strand Bias (log2 ratio + to - strand density) | -1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCGTGTCTGT VBSYGTCTGG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCGTGTCTGT --CTGTCTGG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCGTGTCTGT --TWGTCTGV |
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Hes2/MA0616.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCGTGTCTGT- GCACGTGTCNNNN |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGTGTCTGT---- GGNGCGNCTGTTNNN |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCGTGTCTGT----- NNTNNTGTCTGGNNTNG |
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HEY2/MA0649.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCGTGTCTGT GGCACGTGNC--- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGTGTCTGT----- ---TGTCTGDCACCT |
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Gata1/MA0035.3/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCGTGTCTGT TTCTTATCTGT |
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Pax2/MA0067.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCGTGTCTGT NCGTGACN-- |
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