p-value: | 1e-6 |
log p-value: | -1.595e+01 |
Information Content per bp: | 1.787 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 2.54% |
Number of Background Sequences with motif | 248.7 |
Percentage of Background Sequences with motif | 0.54% |
Average Position of motif in Targets | 50.3 +/- 24.9bp |
Average Position of motif in Background | 50.0 +/- 34.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SCRT1/MA0743.1/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ACTTGTWGST- ANCCACCTGTTGCNC |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACTTGTWGST- CCACCTGTTGCAT |
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PH0086.1_Irx5/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ACTTGTWGST- ANTNNTACATGTANNTN |
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Hes2/MA0616.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACTTGTWGST- GCACGTGTCNNNN |
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CLOCK/MA0819.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACTTGTWGST AACACGTGTT--- |
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PH0084.1_Irx3_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ACTTGTWGST- NNTATTACATGTANNNT |
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PH0085.1_Irx4/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ACTTGTWGST- NNTTTTACATGTANNNT |
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PH0082.1_Irx2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----ACTTGTWGST-- TAAATACATGTAAAATT |
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PH0083.1_Irx3_1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ACTTGTWGST- ANTATTACATGTANNNN |
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Npas2/MA0626.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACTTGTWGST GGCACGTGTC--- |
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