Information for 5-CAGGTGGCGCCAC (Motif 4)

A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
Reverse Opposite:
A T C G G C A T A C T G A T C G A G T C T A C G A T G C G T A C G C T A A G T C A T G C A G C T T A C G
p-value:1e-13
log p-value:-3.041e+01
Information Content per bp:1.754
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.4 +/- 31.5bp
Average Position of motif in Background50.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGGCGCCAC---
NNNNTTGGCGCCGANNN
 A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAGGTGGCGCCAC---
TTGGGGGCGCCCCTAG
 A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGTGGCGCCAC--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGGTGGCGCCAC
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGGCGCCAC---
NNNNTTGGCGCCGANNN
 A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CAGGTGGCGCCAC
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGGTGGCGCCAC-
--TTTGGCGCCAAA
 A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C A C G T
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCAC
NNCAGGTGNN-----
 A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGCGCCAC
SDGCAGGTGCNS----
 A C G T A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCAC
AACAGGTGNT-----
 A C G T A C G T A G T C C T G A A T C G T A C G C G A T A C T G A T C G A G T C C T A G A T G C A G T C C G T A A T G C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T