Information for 4-TGGGGAAAAGTCA (Motif 3)

A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A T G C C G A T A G C T A C G T A C G T A G T C G T A C T A G C G T A C T C G A
p-value:1e-13
log p-value:-3.223e+01
Information Content per bp:1.816
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets33.0 +/- 26.1bp
Average Position of motif in Background50.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TGGGGAAAAGTCA-
-----AAAAGTCAA
 A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGGGAAAAGTCA
-ANGNAAAGGTCA
 A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGGGAAAAGTCA
TAGGGCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGAAAAGTCA
TGGGGCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGGGAAAAGTCA
GTAGGGCAAAGGTCA
 A C G T A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGGGAAAAGTCA
GGGGTCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGGGAAAAGTCA
GAGGTCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGGGAAAAGTCA
GGGGTCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGGGAAAAGTCA----
-TCTCAAAGGTCACGAG
 A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGGGAAAAGTCA
GGGGTCAAAGGTCA
 A C G T A G C T A C T G A T C G A C T G A C T G C G T A C G T A C T G A C G T A A T C G C G A T A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A