Information for 5-TAAAABAYAGGCTTGA (Motif 6)

A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
Reverse Opposite:
C A G T A T G C C G T A C G T A A C T G G A T C G A T C A G C T C T G A A C G T T A G C A C G T A C G T A C G T C G A T C T G A
p-value:1e-12
log p-value:-2.783e+01
Information Content per bp:1.682
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.3 +/- 28.6bp
Average Position of motif in Background49.5 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TAAAABAYAGGCTTGA
NGYCATAAAWCH---------
 A C G T A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TAAAABAYAGGCTTGA
NCYAATAAAA-----------
 A C G T A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TAAAABAYAGGCTTGA
CCAATAAAAA----------
 A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TAAAABAYAGGCTTGA
--------AAGCTTG-
 A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TAAAABAYAGGCTTGA
NGCAATTAAA-----------
 A C G T A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TAAAABAYAGGCTTGA
GCAATAAAA-----------
 A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------TAAAABAYAGGCTTGA
AATGCAATAAAATTTAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAABAYAGGCTTGA
CCYMATAAAA-----------
 A C G T A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TAAAABAYAGGCTTGA
GTCATAAAAN----------
 A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TAAAABAYAGGCTTGA
CCAATAAAAA----------
 A C G T A C G T A C G T A C G T A G C T G C T A G T C A C G T A C G T A A T C G G T C A A G C T C T G A C T A G C T A G T G A C C G A T A C G T A T C G G C T A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T