Information for 17-YTRGGCCASAAAC (Motif 29)

G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
Reverse Opposite:
A C T G C G A T A C G T A C G T T A G C C G A T A C T G A C T G A T G C A G T C G A C T C T G A C T G A
p-value:1e-7
log p-value:-1.746e+01
Information Content per bp:1.724
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif88.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets49.6 +/- 26.2bp
Average Position of motif in Background48.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YTRGGCCASAAAC
CTAGGCCT-----
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:YTRGGCCASAAAC
--AAGCCATAAAA
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YTRGGCCASAAAC
CNAGGCCT-----
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YTRGGCCASAAAC
TTTGGCGGGAAA-
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YTRGGCCASAAAC
TTTTGGCGGGAAAA
 A C G T G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----YTRGGCCASAAAC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YTRGGCCASAAAC
---GGCGGGAAAH
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YTRGGCCASAAAC--
---NGYCATAAAWCH
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YTRGGCCASAAAC---
AAAGGTAATAAAATTT
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YTRGGCCASAAAC-
----GTCATAAAAN
 G A C T G A C T C T G A C T A G A T C G A G T C G T A C G C T A A T C G G T C A C G T A C G T A G T A C A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T