p-value: | 1e-10 |
log p-value: | -2.323e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 47.6 +/- 36.5bp |
Average Position of motif in Background | 78.7 +/- 19.3bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTCACCTAGTAAT- TTGACCTANTTATN |
|
|
|
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTCACCTAGTAAT NNACTTACCTN----- |
|
|
|
ZEB1/MA0103.2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTCACCTAGTAAT CCTCACCTG----- |
|
|
|
HMBOX1/MA0895.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT- ----ACTAGTTAAC |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT--- -CCGCATAGCAACGGA |
|
|
|
MF0010.1_Homeobox_class/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT- -------AATAATT |
|
|
|
Arid3b/MA0601.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT--- -----ATATTAATTAA |
|
|
|
BSX/MA0876.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | CTCACCTAGTAAT--- --------NTAATTGG |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT-- ---SCCTAGCAACAG |
|
|
|
PH0062.1_Hoxb7/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CTCACCTAGTAAT-------- -----GTAGTAATTAATGCAA |
|
|
|