Information for 1-VGSCGCCATGKYS (Motif 1)

T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
Reverse Opposite:
A T C G T C A G G T A C T G A C C G T A A C G T A C T G A C T G G T A C A C T G T A C G T A G C A C T G
p-value:1e-15
log p-value:-3.637e+01
Information Content per bp:1.613
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif10.52%
Number of Background Sequences with motif1912.3
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets50.0 +/- 26.1bp
Average Position of motif in Background51.7 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:VGSCGCCATGKYS
GTCCGCCATTA--
 T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:VGSCGCCATGKYS
-GCCGCCATCTTG
 T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:VGSCGCCATGKYS
-GCNGCCATCTTG
 T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----VGSCGCCATGKYS
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----VGSCGCCATGKYS
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:VGSCGCCATGKYS
---TGCCAA----
 T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:VGSCGCCATGKYS
-CGTGCCAAG---
 T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----VGSCGCCATGKYS
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-VGSCGCCATGKYS
AGCGCGCC------
 A C G T T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--VGSCGCCATGKYS
TTTGGCGCCAAA---
 A C G T A C G T T G A C A T C G A T G C T G A C A C T G A G T C A G T C C G T A C G A T A C T G C A T G A G T C T A G C
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T