Information for 9-CGGCTGACGGCGG (Motif 18)

A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A G T C A G T C A C T G
p-value:1e-7
log p-value:-1.795e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 20.5bp
Average Position of motif in Background53.4 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGCTGACGGCGG---
-GGGNGGGGGCGGGGC
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGACGGCGG---
NAGANTGGCGGGGNGNA
 A C G T A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGGCTGACGGCGG--
----TAATGGCGGNC
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGCTGACGGCGG---
--GGCGGGGGCGGGGG
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGGCTGACGGCGG---
----RGKGGGCGGAGC
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTGACGGCGG-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGCTGACGGCGG
--GATGACGT---
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G
A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGGCTGACGGCGG----
NNNAAGGGGGCGGGNNN
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CGGCTGACGGCGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGGCTGACGGCGG---
-----GGGGGCGGGGC
 A G T C A C T G A C T G G T A C A C G T A C T G T C G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C