Information for 4-AAGCGTCTCCGTGGTG (Motif 8)

C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A T G C A G T C C G T A A G T C A C T G T A C G C G T A T C A G C T G A A T G C A C T G A G T C C G A T C G A T
p-value:1e-12
log p-value:-2.812e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 27.3bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG
------TTAAGTGGT-
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG
----------GTGGAT
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG
------TTAAGTGGN-
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGTCTCCGTGGTG
NTNNCGTATCCAAGTNN
 A C G T C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

GLIS3/MA0737.1/Jaspar

Match Rank:5
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG----
------CTTCGTGGGGGGTC
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG--
------NTCGGTGGTCGC
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.48
Offset:6
Orientation:forward strand
Alignment:AAGCGTCTCCGTGGTG
------TTRAGTGSYK
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG
------TTGCGTGCVA
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:AAGCGTCTCCGTGGTG
------TTAAGTGCTT
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AAGCGTCTCCGTGGTG
-------TGCGTG---
 C G T A C G T A A C T G A G T C A T C G A G C T A G T C A C G T A G T C G T A C A C T G A C G T A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T