Information for 4-TGTGTGCTGTGTG (Motif 6)

A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
Reverse Opposite:
T G A C C G T A T G A C G T C A A G T C C T G A C T A G A T G C C T G A A G T C G T C A G T A C G T C A
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.757
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif39.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.2 +/- 27.5bp
Average Position of motif in Background53.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGCTGTGTG
NNNNTTGTGTGCTTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGCTGTGTG
NNGCGTGTGTGCNGCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGTGTGCTGTGTG----
---GTGCCGTGTGCAAA
 A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGCTGTGTG--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGTGTGCTGTGTG
-CTGTTCCTGG--
 A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGCTGTGTG
TTGCGTGCVA----
 A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGTGTGCTGTGTG
-----GCTGTG--
 A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGTGTGCTGTGTG
TGCGTG-------
 A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGCTGTGTG
NNHTGTGGTTWN--
 A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------TGTGTGCTGTGTG-
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G A C T A T C G A G T C A G C T T A C G C A G T A C T G C G A T A C T G A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G