Information for 18-GGAAHCCCCTCAGTCC (Motif 27)

A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
Reverse Opposite:
C T A G A T C G C T G A G T A C A C G T A C T G G T C A A C T G A T C G A C T G A T C G C A T G A C G T A C G T A T G C A T G C
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.723
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 17.2bp
Average Position of motif in Background20.0 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAAHCCCCTCAGTCC
-GACCCCCCGCTGTGC
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAAHCCCCTCAGTCC
GGGGGAATCCCC-------
 A C G T A C G T A C G T A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAAHCCCCTCAGTCC
-GACCCCCCGCTGCGC
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAAHCCCCTCAGTCC
AGGGGATTCCCCT------
 A C G T A C G T A C G T A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAAHCCCCTCAGTCC
TATCGACCCCCCACAG---
 A C G T A C G T A C G T A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAAHCCCCTCAGTCC
AGGGGAATCCCCT------
 A C G T A C G T A C G T A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAAHCCCCTCAGTCC
-GACCCCCCGCTGTG-
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAAHCCCCTCAGTCC
-GACCCCCCGCGAAG-
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAAHCCCCTCAGTCC
GGAAANCCCC------
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGAAHCCCCTCAGTCC
---CCCCCCCCAC---
 A T C G A T C G T G C A T C G A G T A C A T G C G T A C A T G C A G T C C A G T A G T C G T C A A C T G A G C T A T G C A G T C
A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T