Information for 2-RCCCCYTGGYGGTTCT (Motif 2)

C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
Reverse Opposite:
C T G A A C T G G T C A C T G A A G T C A G T C C T G A A G T C A G T C C T G A C T A G A C T G A T C G A T C G C T A G G A T C
p-value:1e-15
log p-value:-3.636e+01
Information Content per bp:1.812
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.1 +/- 23.0bp
Average Position of motif in Background26.7 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------RCCCCYTGGYGGTTCT
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----RCCCCYTGGYGGTTCT
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RCCCCYTGGYGGTTCT
CCCCCCCGGGGGNN--
 C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----RCCCCYTGGYGGTTCT
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RCCCCYTGGYGGTTCT
CCCCCCCGGGGGGGT--
 A C G T C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RCCCCYTGGYGGTTCT
CCCCCCCGGGGGGGT--
 A C G T C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:RCCCCYTGGYGGTTCT
------TTGCGGTTT-
 C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RCCCCYTGGYGGTTCT---
--NNANTGGTGGTCTTNNN
 C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:RCCCCYTGGYGGTTCT
-----TTTGCGGTTT-
 C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RCCCCYTGGYGGTTCT
GCTTCGTGGGGGGTCT
 C T A G A G T C A T G C A T G C A G T C A G T C A G C T C T A G A C T G A G C T A C T G C T A G A G C T A C G T A G T C G A C T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T