Information for 3-CAACATGAATCAT (Motif 5)

A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G C T G A A C G T A C G T A G T C G T C A A C G T A C T G A G C T A C G T A C T G
p-value:1e-13
log p-value:-3.073e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.7 +/- 19.7bp
Average Position of motif in Background42.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFE2/MA0841.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAACATGAATCAT-
---CATGACTCATC
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CAACATGAATCAT
----ATGACTCAT
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CAACATGAATCAT
--TCATCAATCA-
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAACATGAATCAT
-GCCATAAATCA-
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAACATGAATCAT-
---NATGAGTCACN
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAACATGAATCAT---
GAAGATCAATCACTTA
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAACATGAATCAT
-GYCATCMATCAT
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAACATGAATCAT-
---NATGAGTCANN
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAACATGAATCAT-
--CCATCAATCAAA
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAACATGAATCAT-
----ATGASTCATH
 A G T C C G T A C T G A A G T C C G T A A C G T C T A G C G T A C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A