Information for 7-ACCTCGCACA (Motif 28)

G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T C G A G T C A C T G C G T A A T C G A C T G A C G T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.858
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets73.2 +/- 16.4bp
Average Position of motif in Background56.1 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACCTCGCACA-
-CCAGGAACAG
 G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACCTCGCACA-------
-CGAAGCACACAAAATA
 G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCTCGCACA---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACCTCGCACA----
GACCACGCCCTTATT
 A C G T G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ACCTCGCACA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACCTCGCACA
GCCCCACCCA
 G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACCTCGCACA-
GCCACGCCCCC
 G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------ACCTCGCACA
TNAACGACGTCGNCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACCTCGCACA--
GCCACGCCCACT
 G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGCACA---
NRGCCCCRCCCHBNN
 A C G T A C G T G T C A A G T C A T G C G C A T T G A C C T A G A T G C G T C A A G T C C G T A A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C