Information for 5-TGGATGGGCA (Motif 23)

A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A
Reverse Opposite:
A C G T A C T G A T G C A G T C A T G C G T C A A C G T T G A C A G T C T C G A
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.837
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif238.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets48.0 +/- 26.3bp
Average Position of motif in Background46.6 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TGGATGGGCA---
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGGATGGGCA-
--NGTGGGCAT
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGGATGGGCA
WDNCTGGGCA
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGGATGGGCA-
--TNNGGGCAG
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

EGR4/MA0733.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGATGGGCA---
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGATGGGCA-
-GGAGGGGGAA
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGATGGGCA
CGTGGGTGGTCC
 A C G T A C G T A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGATGGGCA--
--NNTTGGCANN
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGATGGGCA-
--GGTTGGCAT
 A G C T A C T G A C T G T G C A A C G T A T C G C T A G A T C G G T A C G T C A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T