Information for 1-TCCAGTGTCCCTG (Motif 1)

C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
Reverse Opposite:
G T A C C T G A A C T G A C T G A C T G C T G A A T G C G T C A G A T C A C G T C T A G A T C G C G T A
p-value:1e-17
log p-value:-3.915e+01
Information Content per bp:1.766
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif42.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.4 +/- 27.6bp
Average Position of motif in Background46.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTGTCCCTG
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCCAGTGTCCCTG-
----CTGTTCCTGG
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCAGTGTCCCTG
NCCATTGTTC---
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTCCCTG
-CCATTGTTYB--
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTCCCTG
-CCTTTGTT----
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTCCCTG
-CCATTGTTTT--
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCAGTGTCCCTG
NCCATTGTTY---
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTCCCTG
-CCWTTGTYYB--
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGTGTCCCTG
NTCAAGTGG-----
 A C G T C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCCAGTGTCCCTG-
----RYHYACCTGB
 C G A T A T G C A G T C G T C A C A T G A C G T T A C G A G C T T G A C T A G C T A G C A G C T C A T G A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T