Information for 7-GAGTGGGATT (Motif 28)

A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A G T C C G T A A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.277e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 31.6bp
Average Position of motif in Background61.2 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----GAGTGGGATT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PH0122.1_Obox2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGATT------
TGAGGGGGATTAACTAT
 A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGATT------
TTAGAGGGATTAACAAT
 A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGATT------
TGAGGGGGATTAACTAT
 A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGATT------
TTAAGGGGATTAACTAC
 A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGTGGGATT-------
-AGGGGGATTAGCTGCC
 A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GAGTGGGATT---
----GGGATTANN
 A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGTGGGATT-
---NGGGATTA
 A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAGTGGGATT--
----GGGATTAA
 A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAGTGGGATT--
----RGGATTAR
 A C T G C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G