Information for 4-AGGCSTGTAG (Motif 19)

C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
Reverse Opposite:
A G T C A C G T G T C A A G T C G T C A T A G C A T C G G T A C A G T C C G A T
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.774
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif75.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.2 +/- 26.8bp
Average Position of motif in Background51.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCSTGTAG
AGGCCTNG--
 C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGCSTGTAG--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGCSTGTAG
CTAGGCCT----
 A C G T A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGCSTGTAG
AAGGCAAGTGT
 A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGCSTGTAG
CWGGCGGGAA-
 A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCSTGTAG--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AGGCSTGTAG
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGCSTGTAG
TAGGTGTGAAG
 A C G T C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCSTGTAG
-TGCGTG---
 C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGCSTGTAG-
GGGCGGGAAGG
 C G T A A C T G A C T G A T G C A T C G A C G T A C T G C A G T G T C A A C T G A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G