Information for 3-AKGGACAGYAKMG (Motif 3)

C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
Reverse Opposite:
A G T C C A G T G T A C A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C T G A C A C G T
p-value:1e-15
log p-value:-3.610e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 23.8bp
Average Position of motif in Background37.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AKGGACAGYAKMG
CCAGGAACAG-----
 A C G T A C G T C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AKGGACAGYAKMG-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AKGGACAGYAKMG
---CACAGN----
 C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AKGGACAGYAKMG
-TTGACAGC----
 C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AKGGACAGYAKMG
NTGATTGACAGN----
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AKGGACAGYAKMG---
ATGTACAGTAGCAAAG
 C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AKGGACAGYAKMG
-TTGACAGG----
 C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AKGGACAGYAKMG---
ATTTACAGTAGCAAAA
 C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AKGGACAGYAKMG
TGAGTGACAGSC---
 A C G T A C G T C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AKGGACAGYAKMG
BTGABTGACAGS----
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G C G T A A G T C C G T A A C T G A G T C C G T A A C T G G T C A A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T