Information for 12-TGGCAMMTMYGAC (Motif 22)

A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
Reverse Opposite:
A C T G A C G T A G T C C T G A A C G T C G T A A C G T A C G T A C G T A C T G A G T C A G T C C G T A
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 32.8bp
Average Position of motif in Background44.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAMMTMYGAC
NTTGGCANN------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAMMTMYGAC
CTTGGCAA-------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAMMTMYGAC
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGGCAMMTMYGAC----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGCAMMTMYGAC
TTGGCA--------
 A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAMMTMYGAC
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGCAMMTMYGAC
TGTCANYT-----
 A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCAMMTMYGAC
TGACACCT-----
 A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAMMTMYGAC
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAMMTMYGAC
NGTGGGCAT-------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A G T C A G T C A A C G T G T C A G A C T A C T G C G T A G T A C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T