Information for 12-TGTTSRAMAMAWGGAM (Motif 16)

A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
Reverse Opposite:
A C T G A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G C G A T G A C T A T C G C G T A C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 27.0bp
Average Position of motif in Background37.0 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
------NNATAAGGNN
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
-----NACATATGGN-
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
-----AACAKATGGY-
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
--TNCCATATATGGNA
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
-----AACAGATGGT-
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:6
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------TGTTSRAMAMAWGGAM
NVCAKCTGGNNNCCAGMTGB--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
------ACATATGG--
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGTTSRAMAMAWGGAM
NATGTTGCAA--------
 A C G T A C G T A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:TGTTSRAMAMAWGGAM
-----AACAGATGGC-
 A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TGTTSRAMAMAWGGAM
TAATTGTTCTAAAC------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T G C C T G A C G T A G T A C C G T A T G C A C G T A C G A T A C T G A T C G C G T A G T A C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T