Information for 7-CACCAAACATGTA (Motif 14)

G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A
Reverse Opposite:
A G C T G T C A A G T C C G T A A C G T A C T G A C G T C G A T A C G T A C T G A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 25.7bp
Average Position of motif in Background26.3 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-AATATACATGTAAAACA
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-TAAATACATGTAAAATT
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-AATATACATGTAAAATT
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-AAAATACATGTAATACT
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-AATATACATGTAATATA
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACCAAACATGTA-----
-AAAATACATGTAAAAAT
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACCAAACATGTA
--CCATATATGG-
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACCAAACATGTA-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACCAAACATGTA-
--CCATATATGGNA
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACCAAACATGTA-
TTCCATATATGGAA
 G T A C C G T A A G T C G T A C C G T A C G T A C G T A G T A C C G T A A C G T A C T G A C G T C T G A A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A