Information for 6-GAARGRCCTWKAA (Motif 13)

A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T G T C A C G A T C G T A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 22.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
--ATGACCTTGAA
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

HSF1/MA0486.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
GAACGTTCTAGAA
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
GAANGTTCTAGAA
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
GAANNTTCTAGAA
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAARGRCCTWKAA
TAGAANVTTCTAGAA
 A C G T A C G T A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAARGRCCTWKAA
---AGGCCTAG--
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
---TGACCTTGAN
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAARGRCCTWKAA
---AGGCCTNG--
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAARGRCCTWKAA
-NATGACCTTGA-
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAARGRCCTWKAA---
-GCTGACCTTGAACTN
 A C T G C G T A C G T A C T G A A C T G C T A G A G T C G T A C A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T