Information for 16-CCTACTGGCC (Motif 28)

A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.215e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 31.4bp
Average Position of motif in Background56.5 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCTACTGGCC
CCGATTGGCT
A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------CCTACTGGCC-
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTACTGGCC--
-NNACTTGCCTT
A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGCC---
TGACCCAGTGACCTAC
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTACTGGCC--
CGACCAACTGCCGTG
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------CCTACTGGCC-
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTACTGGCC---
CGACCAACTGCCATGC
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTACTGGCC
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGCC
CCCCCTGCTGTG-
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-11
Orientation:forward strand
Alignment:-----------CCTACTGGCC
CNNBRGCGCCCCCTGSTGGC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T