p-value: | 1e-11 |
log p-value: | -2.549e+01 |
Information Content per bp: | 1.787 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.6 +/- 22.9bp |
Average Position of motif in Background | 29.1 +/- 10.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC -----TTGCCAAG--- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCHGTTTGBCAAGCTC ---NTTTTACGAGN-- |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 3 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC- -------NTCAAGGTCA |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC ----------CAGCC- |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC- -------BTCAAGGTCA |
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Nr2e3/MA0164.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC ---------CAAGCTT |
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NFIA/MA0670.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC ----GGTGCCAAGT-- |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC ---HTTTCCCASG--- |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCHGTTTGBCAAGCTC- -ANATTTTACGAGNNNN |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GCHGTTTGBCAAGCTC--- --------TCAAGGTCATA |
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