Information for 6-ATTCAAATTTTGW (Motif 9)

C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
Reverse Opposite:
C G A T G T A C C G T A C G T A G C T A T C G A A C G T A C G T C G A T A C T G G T C A C G T A C G A T
p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.740
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif39.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.5 +/- 25.7bp
Average Position of motif in Background52.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAATTTTGW
NATTCAAAT-----
 A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAAATTTTGW
TTATGCAAAT-----
 A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAATTTTGW
TATGCAAAT-----
 A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAATTTTGW
AATATGCAAATT----
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAAATTTTGW
ATATGCAAATNNN--
 A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAATTTTGW
TTATGCAAATTA---
 A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAATTTTGW
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAATTTTGW
TATGCWAATBAV--
 A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAATTTTGW
ATATGCAAAT-----
 A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAATTTTGW
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A T G C A C G T A A G C T C G A T G C A T A C G T A C T G G C T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T