Information for 11-CWGTGCCAGAGCT (Motif 20)

A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
Reverse Opposite:
T G C A A T C G A G T C A C G T A G T C C A G T A C T G A C T G A T G C G T C A A G T C C G T A T C A G
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.1 +/- 17.6bp
Average Position of motif in Background55.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
-CGTGCCAAG---
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CWGTGCCAGAGCT
---TGCCAA----
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
--GAGSCCGAGC-
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
--ATGCCCACC--
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
--ATGCCAACC--
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CWGTGCCAGAGCT
CTGTTCCTGG---
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
-GGTGCCAAGT--
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CWGTGCCAGAGCT
--TTGCCAAG---
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CWGTGCCAGAGCT-
GGGTGTGCCCAAAAGG
 A C G T A C G T A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CWGTGCCAGAGCT
--ATGCCAGACN-
 A G T C C G A T C T A G A C G T A T C G A G T C A G T C G T C A C T A G T G C A C T A G A T G C A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T