Information for 6-SCTCWGWTAWCWG (Motif 13)

T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G C G T A A C T G A T C G
p-value:1e-4
log p-value:-1.080e+01
Information Content per bp:1.846
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 6.4bp
Average Position of motif in Background29.7 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-SCTCWGWTAWCWG---
GACAGAGATATCAGTGT
 A C G T T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:SCTCWGWTAWCWG----
ACTTAGTTAACTAAAAA
 T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SCTCWGWTAWCWG----
CCTTAGTTAACTAAAAT
 T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-SCTCWGWTAWCWG---
NNNNCTGTTAACNNTNN
 A C G T T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SCTCWGWTAWCWG-
--ACCGTTAACGGT
 T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T
A C G T A C G T C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-SCTCWGWTAWCWG
GKVTCADRTTWC--
 A C G T T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SCTCWGWTAWCWG
----YSTTATCT-
 T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-SCTCWGWTAWCWG
GKMTCADRTTWC--
 A C G T T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-SCTCWGWTAWCWG---
NGCTGCGATATCGNCGC
 A C G T T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G A C G T A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SCTCWGWTAWCWG
----TCTTATCT-
 T A C G A G T C C G A T A G T C C G T A A C T G C G T A A C G T C G T A C G A T A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T