Information for 6-TTTAAACATCTATHCA (Motif 7)

C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
Reverse Opposite:
C G A T C T A G C G A T C G T A C G A T T C G A T C A G C T G A C G A T C A T G A C G T A G C T A C G T C G T A G C T A C G T A
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.695
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 29.3bp
Average Position of motif in Background52.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
ANTNNTACATGTANNTN
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTAAACATCTATHCA
--AAAAAATCGATAAT
 C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
ANTNTTACATGTATNTA
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
ANTTNTACATGTANTTN
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
NNTTTTACATGTANNNT
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTAAACATCTATHCA
--AAAAAATCGATAAT
 C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTAAACATCTATHCA
--AAAAAATCAATAAT
 C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
ANTATTACATGTANNNN
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTTAAACATCTATHCA--
-TCACCCATCAATAAACA
 C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAACATCTATHCA
NNTATTACATGTANNNT
 A C G T C G A T C G A T C G A T T G C A T C G A G T C A G T A C C G T A A G C T A G T C A C G T C G T A A C G T G C T A G A T C C G T A
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T