Information for 4-CWGACTKRAKTTYCYC (Motif 5)

A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G A C T G C T G A C G T A C G T A G T A C A C G T A G C T G T C A C G T A A C T G A C G T A G T C C G A T A C T G
p-value:1e-11
log p-value:-2.728e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.6 +/- 23.9bp
Average Position of motif in Background41.4 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CWGACTKRAKTTYCYC
---ACTACAATTCCC-
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CWGACTKRAKTTYCYC
--GKMTCADRTTWC--
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWGACTKRAKTTYCYC
---ACTTTCGTTTCT-
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CWGACTKRAKTTYCYC----
------NNACTTCCTCTTNN
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CWGACTKRAKTTYCYC-
----------TTCCTCT
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CWGACTKRAKTTYCYC
CCAGACAG---------
 A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CWGACTKRAKTTYCYC
BCAGACWA---------
 A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CWGACTKRAKTTYCYC
TGCTGACTCA--------
 A C G T A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CWGACTKRAKTTYCYC-
-------CACTTCCTCT
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CWGACTKRAKTTYCYC
TTGAATGAAATTCGA-
 A G T C C G T A A C T G G T C A A G T C A C G T A C G T C T G A C G T A A C T G A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T