Information for 2-YCTGACCTGACASYTT (Motif 2)

A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
Reverse Opposite:
T C G A C G T A C T G A T A G C C G A T A C T G A G C T A G T C C G T A A C T G A C T G C G A T G T A C C G T A A C T G C T A G
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.737
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 33.0bp
Average Position of motif in Background23.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:YCTGACCTGACASYTT
CCTCACCTG-------
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--YCTGACCTGACASYTT
NNACTTACCTN-------
 A C G T A C G T A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:YCTGACCTGACASYTT
--TGACCTYA------
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YCTGACCTGACASYTT
--TGACCT--------
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YCTGACCTGACASYTT
NGATGACGTGGCAN---
 A C G T A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YCTGACCTGACASYTT
----VGCTGWCAVB--
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCTGACCTGACASYTT
GATGACGTGGCANT--
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YCTGACCTGACASYTT
TGATGACGTGGCAN---
 A C G T A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YCTGACCTGACASYTT
--TGACCTTGAT----
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YCTGACCTGACASYTT
RYHYACCTGB------
 A G T C A G T C A C G T A C T G G C T A A G T C G T A C A C G T A C T G T C G A T A G C C G T A A T C G A G C T A C G T A G C T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T