Information for 3-TCTTCCCTTTCTT (Motif 6)

A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
Reverse Opposite:
C G T A C G T A A T C G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G C G T A
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.2 +/- 13.0bp
Average Position of motif in Background14.8 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCCCTTTCTT
TACTTCCTCTTTTN
 A C G T A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTTCCCTTTCTT
-----CCTTTGTT
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTTCCCTTTCTT--
-----CCTTTGTTTT
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTTCCCTTTCTT
ACTTTCGTTTCT-
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCCCTTTCTT
NNACTTCCTCTTNN-
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCCCTTTCTT
ANTTTCGCTTTCGN
 A C G T A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCCCTTTCTT
TACTTCCGCTTTTT
 A C G T A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCTTCCCTTTCTT--
---TNCCTTTGATGT
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTTCCCTTTCTT--
-----YCTTTGTTCC
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTTCCCTTTCTT
-----CCWTTGTY
 A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T