Information for 2-AGCACTCAGTCCACTG (Motif 2)

C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
Reverse Opposite:
A T G C C G T A A T C G A C G T A C T G C T A G G C T A A T G C C G A T T A C G C G T A C T A G A C G T A C T G A G T C C G A T
p-value:1e-12
log p-value:-2.793e+01
Information Content per bp:1.710
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.4 +/- 21.7bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCACTCAGTCCACTG
--CNGTCACGCCAC--
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCACTCAGTCCACTG
AAGCACTTAA-------
A C G T C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AGCACTCAGTCCACTG
--------ATCCAC--
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCACTCAGTCCACTG
MRSCACTYAA-------
A C G T C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGCACTCAGTCCACTG
----ATCACCCCAT--
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCACTCAGTCCACTG
-WCATTTTGKCCTCYT
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCACTCAGTCCACTG
TGGACTTTGNNCTNTG
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCACTCAGTCCACTG
AGCGGCACACACGCAA---
A C G T A C G T A C G T C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGCACTCAGTCCACTG
----ATCACCCCAC--
C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCACTCAGTCCACTG
ATTGGACTTTGACCCC--
A C G T A C G T C G T A T A C G T A G C C G T A A G T C C G A T A G T C C G T A A T C G C A G T A G T C A G T C G T C A A T G C C G A T A T C G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T