Information for 12-GGGCCTAGCT (Motif 18)

A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G A T C G T A A T C G A T C G A G T C G A T C A G T C
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.792
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif115.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.2 +/- 31.7bp
Average Position of motif in Background46.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGCCTAGCT
AGGCCTAG--
 A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCTAGCT--
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCTAGCT
BNTGDCCTTG--
 A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGGCCTAGCT-
------NGCTN
 A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCTAGCT--
NNGCACCTTTCTCC
 A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGCCTAGCT
AGGCCTNG--
 A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGCCTAGCT
TGACCTARTT
 A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGCCTAGCT
AAGGGGGCGTGGCC
 A C G T A C G T A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGCCTAGCT
MKGGGYGTGGCC
 A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCTAGCT
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T A G A T G C T A G C A C G T C G T A A T C G G T A C A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C