Information for 6-AAAGSCCCAG (Motif 3)

C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T C G A C T G A T G C G T A C A C G T C G A T A G C T
p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.818
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif373.5
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets45.7 +/- 29.2bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAGSCCCAG-----
-CAGGCCNNGGCCNN
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGSCCCAG
--AGGCCTAG
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAAGSCCCAG---
---TGCCCAGNHW
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGSCCCAG-
-AAGACCCYYN
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAGSCCCAG
--AGGCCTNG
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAGSCCCAG
GGAAATCCCC--
 A C G T A C G T C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGSCCCAG-
-GAGSCCGAGC
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGSCCCAG--
-AAACCACAGAN
 C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAGSCCCAG
GGAAATTCCC--
 A C G T A C G T C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAGSCCCAG
GGAAANCCCC--
 A C G T A C G T C T G A C G T A C G T A A C T G T A C G A G T C A T G C A G T C G T C A A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T