Information for 15-GGGTGCGAAG (Motif 24)

C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
Reverse Opposite:
A T G C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.795e+01
Information Content per bp:1.920
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets31.5 +/- 32.7bp
Average Position of motif in Background49.1 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCGAAG
AAGGTGTKAA-
 A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGGTGCGAAG---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCGAAG
TAGGTGTGAAG
 A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCGAAG
AAGGTGTGAA-
 A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGTGCGAAG
AGGTGTGAAA
 C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCGAAG--
AAGGTGTGAAAAT
 A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGTGCGAAG
AGGTGTTAAT
 C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCGAAG
AAGGTGTGAAA
 A C G T C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGTGCGAAG
AGGTGTGA--
 C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGTGCGAAG-
-GGTGCCAAGT
 C T A G C T A G A C T G A C G T A C T G A G T C A C T G C G T A C G T A A T C G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T