Information for 14-AACTTAATGGATG (Motif 15)

G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T A G T C G T A C G C T A A C G T A C G T G T C A C T G A A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 16.3bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0088.1_Isl2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AACTTAATGGATG---
AAATTAATTGATTTNG
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G A C G T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACTTAATGGATG--
ACTATGAATGAATGAT
 A C G T G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACTTAATGGATG
---CTAATCGNT-
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACTTAATGGATG
--GTTAATGGCC-
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AACTTAATGGATG
---CTAATKGV--
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACTTAATGGATG--
-CCTTAATNGNTTTT
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G A C G T A C G T
A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACTTAATGGATG
--GKTAATGR---
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AACTTAATGGATG
---NTAATKGTTT
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AACTTAATGGATG---
NNNTTAATTGGTTTTT
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACTTAATGGATG
--GCTAATTGCT-
 G T C A C G T A A G T C A G C T C A G T C G T A C G T A C G A T A C T G A C T G C T G A A C G T A C T G
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T