Information for 13-CTCGCATCGCGTA (Motif 12)

A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
Reverse Opposite:
C G A T T C G A G T A C A C T G T G A C A T C G G T C A G A C T A T C G A T G C A T C G C T G A A C T G
p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.708
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 23.5bp
Average Position of motif in Background66.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCGCATCGCGTA
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCGCATCGCGTA
TCGTACCCGCATCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCGCATCGCGTA
TACCCGCATN-----
 A C G T A C G T A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCATCGCGTA
GTACCCGCATN-----
 A C G T A C G T A C G T A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCGCATCGCGTA
CACGCA-------
 A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCGCATCGCGTA
TBGCACGCAA------
 A C G T A C G T A C G T A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTCGCATCGCGTA---
------GCACGTACCC
 A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTCGCATCGCGTA
-----BGCACGTA
 A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CTCGCATCGCGTA
-----ATGACGTA
 A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CTCGCATCGCGTA--
-----ATTGCGCAAT
 A G T C A G C T A T G C A T C G T A G C C G T A A C G T A T G C A C T G A G T C A C T G A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T