Information for 1-VNSGCCGCCATSTTGV (Motif 1)

T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
Reverse Opposite:
A T C G T G A C T C G A G T C A T A C G C G T A A C G T A C T G A C T G G T A C A C T G T A C G G A T C A T C G T A G C A G T C
p-value:1e-138
log p-value:-3.200e+02
Information Content per bp:1.583
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif22.90%
Number of Background Sequences with motif984.8
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets50.9 +/- 19.5bp
Average Position of motif in Background52.0 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:VNSGCCGCCATSTTGV
---GCCGCCATCTTG-
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:VNSGCCGCCATSTTGV
---GCNGCCATCTTG-
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.85
Offset:2
Orientation:forward strand
Alignment:VNSGCCGCCATSTTGV
--GTCCGCCATTA---
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--VNSGCCGCCATSTTGV
TACGCCCCGCCACTCTG-
 A C G T A C G T T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:VNSGCCGCCATSTTGV
-----TGCCAA-----
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:VNSGCCGCCATSTTGV
---CGTGCCAAG----
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--VNSGCCGCCATSTTGV
CCTTCGGCGCCAAAAGG-
 A C G T A C G T T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--VNSGCCGCCATSTTGV
AAAATGGCGCCATTTT--
 A C G T A C G T T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:VNSGCCGCCATSTTGV
------GCCATCTGTT
 T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--VNSGCCGCCATSTTGV
AGCTCGGCGCCAAAAGC-
 A C G T A C G T T C A G A T C G T A G C C T A G A T G C T G A C C A T G A G T C A G T C C G T A A C G T A T G C C A G T A G C T A C T G T A G C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T