Information for 9-CTGCTGGGTDTGCGGC (Motif 10)

A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A T C G A G T C C T G A G C T A C G T A G A T C A T G C A G T C G T C A A C T G A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 31.6bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTDTGCGGC
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTDTGCGGC
TCNCCTGCTGNGNNN-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTDTGCGGC
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGCTGGGTDTGCGGC
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGGTDTGCGGC
CCTGCTGAGH-------
 A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTDTGCGGC
NNTCCTGCTGTGNNN-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGGTDTGCGGC
NAACAGCTGG---------
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCTGGGTDTGCGGC
NAAAANTGCTGACTCAGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGGGTDTGCGGC
ANCAGCTG----------
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTDTGCGGC
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C T G A T C G C T A G A C G T C A G T A G C T C T A G A T G C C T A G A C T G G T A C
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T