Information for 1-CAAGATGGCGGCSSCC (Motif 1)

A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
Reverse Opposite:
A T C G C T A G T A C G T A G C C T A G A T G C T A G C A C T G A G T C A G T C C G T A A C G T A G T C C G A T A G C T T A C G
p-value:1e-56
log p-value:-1.309e+02
Information Content per bp:1.669
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif8.50%
Number of Background Sequences with motif335.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets52.8 +/- 19.7bp
Average Position of motif in Background53.6 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCGGCSSCC
CAAGATGGCGGC----
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCGGCSSCC
CAAGATGGCGGC----
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CAAGATGGCGGCSSCC
--TAATGGCGGNC---
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAGATGGCGGCSSCC-
NAGANTGGCGGGGNGNA
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAGATGGCGGCSSCC-
-AAAATGGCGCCATTTT
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCGGCSSCC
AACAGATGGC-------
 A C G T A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAGATGGCGGCSSCC
AAGGCCAGATGGTCCGG---
 A C G T A C G T A C G T A C G T A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCGGCSSCC--
AAAAATGGCGCCATTTTT
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAGATGGCGGCSSCC-
NNNNTTGGCGCCGANNN
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAAGATGGCGGCSSCC
----TTGGCA------
 A T G C C T G A C G T A T C A G C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A T C G A T G C G A T C T A G C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T