Information for 4-GCCGTCAGGC (Motif 9)

A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
Reverse Opposite:
A T C G G T A C A G T C A C G T A C T G G T C A A G T C A C T G A T C G A G T C
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.831
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif42.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets29.0 +/- 16.4bp
Average Position of motif in Background47.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTCAGGC
TGACGTCA---
 A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCGTCAGGC
-ACGTCA---
 A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCGTCAGGC--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCCGTCAGGC--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTCAGGC
GTGACGTCACCG
 A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCGTCAGGC
ATGCCCTGAGGC
 A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTCAGGC
WTGSCCTSAGGS
 A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCCGTCAGGC
--AGTCACGC
 A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTCAGGC
TGACGTCATC-
 A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTCAGGC
RTGACGTCAYCN
 A C G T A C G T A C T G A T G C G T A C C T A G A C G T A G T C C G T A C T A G A C T G A T G C
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G