Information for 2-GTGGTTAGAA (Motif 7)

A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T G T C A C G T A A G T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.891
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.77%
Number of Background Sequences with motif53.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets77.0 +/- 10.4bp
Average Position of motif in Background49.7 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTAGAA
CTGTGGTTTN--
 A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTAGAA----
TATCATTAGAACGCT
 A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTAGAA
GCTGTGGTTT---
 A C G T A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTAGAA
NNTGTGGTTT---
 A C G T A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTAGAA
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTAGAA
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTAGAA
TTGCGGTTT---
 A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTAGAA
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGGTTAGAA-
CAGGTAAGTAT
 A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTAGAA
ACTAGTTAAC-
 A C G T A C T G C G A T C T A G A C T G A C G T A C G T C G T A A C T G G T C A C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T