Information for 6-GCTYTCTGCCCCKGTG (Motif 9)

A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A T G C G T C A A C T G C A T G A C T G A C T G A G T C C G T A A C T G C G T A C T A G C G T A A C T G A T G C
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.7 +/- 22.2bp
Average Position of motif in Background59.1 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTYTCTGCCCCKGTG
VBSYGTCTGG-------
 A C G T A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCTYTCTGCCCCKGTG
SCTGTCARCACC----
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTYTCTGCCCCKGTG
-CTGTCTGG-------
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCTYTCTGCCCCKGTG-
-----CTGCGCATGCGC
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCTYTCTGCCCCKGTG---
--NNTNCGCACCTGTNGAN
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTYTCTGCCCCKGTG
CACTTCCTGT-------
 A C G T A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTYTCTGCCCCKGTG
YCTTTGTTCC------
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GCTYTCTGCCCCKGTG
NNGCACCTTTCTCC-------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GCTYTCTGCCCCKGTG--
------TGCCCTNGGGCA
 A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCTYTCTGCCCCKGTG
ANATTTTTGCAANTN--
 A C G T A T C G A G T C A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A G C G T A C G T A C C A G T A T C G A C G T A C T G
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T