Information for 7-GTTGTGTGGT (Motif 17)

A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T
Reverse Opposite:
C G T A G T A C A G T C G T C A A T G C C G T A A T G C G T C A T G C A G T A C
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.823
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif113.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.2 +/- 27.6bp
Average Position of motif in Background52.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTTGTGTGGT---
-NNHTGTGGTTWN
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GTTGTGTGGT--
--GCTGTGGTTT
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTTGTGTGGT--
-GTCTGTGGTTT
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GTTGTGTGGT---
---CTGTGGTTTN
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GTTGTGTGGT--
--NNTGTGGTTT
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTGTGGT---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTGTGTGGT---
-CAGTGTGGTCGC
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTTGTGTGGT--
--TTTGCGGTTT
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTGTGTGGT--
CGTGGGTGGTCC
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTTGTGTGGT--
---TTGCGGTTT
 A C T G A C G T A C G T A T C G A C G T A T C G A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T