Information for 5-TAAGGCTACG (Motif 13)

A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
Reverse Opposite:
A T G C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A G C T C G T A
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.881
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.1 +/- 20.1bp
Average Position of motif in Background52.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TAAGGCTACG
----GCTCCG
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAAGGCTACG
CAAGGHCANV
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAGGCTACG
-AAGGTCAC-
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAAGGCTACG-----
-CAGGCCNNGGCCNN
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGCTACG
NGCCTNAGGCN---
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TAAGGCTACG
---NGCTN--
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGCTACG
TGCCTGAGGCN---
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAAGGCTACG
-TWGTCTGV-
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGCTACG--
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0094.1_Zfp128_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TAAGGCTACG-------
TTNGGGTACGCCNNANN
 A C G T C T G A C G T A A C T G A C T G A G T C C G A T T G C A A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A