Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-100 | -2.316e+02 | 0.0000 | 106.0 | 12.54% | 286.3 | 0.60% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-67 | -1.556e+02 | 0.0000 | 103.0 | 12.19% | 569.2 | 1.18% | motif file (matrix) |
svg |
3 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-22 | -5.236e+01 | 0.0000 | 71.0 | 8.40% | 961.9 | 2.00% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-22 | -5.198e+01 | 0.0000 | 80.0 | 9.47% | 1213.2 | 2.53% | motif file (matrix) |
svg |
5 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-21 | -4.928e+01 | 0.0000 | 84.0 | 9.94% | 1386.6 | 2.89% | motif file (matrix) |
svg |
6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-21 | -4.885e+01 | 0.0000 | 79.0 | 9.35% | 1249.4 | 2.60% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-20 | -4.755e+01 | 0.0000 | 91.0 | 10.77% | 1641.1 | 3.42% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-16 | -3.709e+01 | 0.0000 | 87.0 | 10.30% | 1804.0 | 3.76% | motif file (matrix) |
svg |
9 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.561e+01 | 0.0000 | 185.0 | 21.89% | 5744.1 | 11.96% | motif file (matrix) |
svg |
10 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-13 | -3.154e+01 | 0.0000 | 180.0 | 21.30% | 5775.2 | 12.02% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-12 | -2.774e+01 | 0.0000 | 33.0 | 3.91% | 402.1 | 0.84% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-11 | -2.617e+01 | 0.0000 | 54.0 | 6.39% | 1036.8 | 2.16% | motif file (matrix) |
svg |
13 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.594e+01 | 0.0000 | 29.0 | 3.43% | 333.5 | 0.69% | motif file (matrix) |
svg |
14 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.294e+01 | 0.0000 | 48.0 | 5.68% | 934.5 | 1.95% | motif file (matrix) |
svg |
15 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-9 | -2.250e+01 | 0.0000 | 33.0 | 3.91% | 493.5 | 1.03% | motif file (matrix) |
svg |
16 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-9 | -2.168e+01 | 0.0000 | 82.0 | 9.70% | 2213.7 | 4.61% | motif file (matrix) |
svg |
17 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-9 | -2.088e+01 | 0.0000 | 97.0 | 11.48% | 2860.6 | 5.96% | motif file (matrix) |
svg |
18 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.986e+01 | 0.0000 | 49.0 | 5.80% | 1063.9 | 2.21% | motif file (matrix) |
svg |
19 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-8 | -1.947e+01 | 0.0000 | 36.0 | 4.26% | 649.4 | 1.35% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-7 | -1.837e+01 | 0.0000 | 47.0 | 5.56% | 1045.7 | 2.18% | motif file (matrix) |
svg |
21 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.749e+01 | 0.0000 | 24.0 | 2.84% | 345.7 | 0.72% | motif file (matrix) |
svg |
22 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-7 | -1.730e+01 | 0.0000 | 57.0 | 6.75% | 1451.5 | 3.02% | motif file (matrix) |
svg |
23 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.713e+01 | 0.0000 | 141.0 | 16.69% | 5061.7 | 10.54% | motif file (matrix) |
svg |
24 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-7 | -1.664e+01 | 0.0000 | 35.0 | 4.14% | 695.1 | 1.45% | motif file (matrix) |
svg |
25 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.597e+01 | 0.0000 | 44.0 | 5.21% | 1026.5 | 2.14% | motif file (matrix) |
svg |
26 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-6 | -1.532e+01 | 0.0000 | 43.0 | 5.09% | 1015.4 | 2.11% | motif file (matrix) |
svg |
27 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-6 | -1.529e+01 | 0.0000 | 40.0 | 4.73% | 909.1 | 1.89% | motif file (matrix) |
svg |
28 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-6 | -1.506e+01 | 0.0000 | 38.0 | 4.50% | 847.3 | 1.76% | motif file (matrix) |
svg |
29 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-6 | -1.497e+01 | 0.0000 | 58.0 | 6.86% | 1599.2 | 3.33% | motif file (matrix) |
svg |
30 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-6 | -1.433e+01 | 0.0000 | 36.0 | 4.26% | 803.5 | 1.67% | motif file (matrix) |
svg |
31 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.398e+01 | 0.0000 | 41.0 | 4.85% | 995.6 | 2.07% | motif file (matrix) |
svg |
32 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.379e+01 | 0.0000 | 61.0 | 7.22% | 1782.1 | 3.71% | motif file (matrix) |
svg |
33 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.342e+01 | 0.0000 | 41.0 | 4.85% | 1018.7 | 2.12% | motif file (matrix) |
svg |
34 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-5 | -1.309e+01 | 0.0000 | 29.0 | 3.43% | 605.6 | 1.26% | motif file (matrix) |
svg |
35 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.159e+01 | 0.0001 | 43.0 | 5.09% | 1178.5 | 2.45% | motif file (matrix) |
svg |
36 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-4 | -1.147e+01 | 0.0001 | 55.0 | 6.51% | 1670.9 | 3.48% | motif file (matrix) |
svg |
37 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.110e+01 | 0.0001 | 51.0 | 6.04% | 1527.4 | 3.18% | motif file (matrix) |
svg |
38 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.107e+01 | 0.0001 | 58.0 | 6.86% | 1821.3 | 3.79% | motif file (matrix) |
svg |
39 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-4 | -1.066e+01 | 0.0002 | 15.0 | 1.78% | 232.0 | 0.48% | motif file (matrix) |
svg |
40 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.051e+01 | 0.0002 | 10.0 | 1.18% | 107.6 | 0.22% | motif file (matrix) |
svg |
41 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-4 | -1.042e+01 | 0.0003 | 15.0 | 1.78% | 237.3 | 0.49% | motif file (matrix) |
svg |
42 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.031e+01 | 0.0003 | 43.0 | 5.09% | 1245.2 | 2.59% | motif file (matrix) |
svg |
43 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.015e+01 | 0.0003 | 58.0 | 6.86% | 1883.6 | 3.92% | motif file (matrix) |
svg |
44 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.008e+01 | 0.0003 | 18.0 | 2.13% | 335.2 | 0.70% | motif file (matrix) |
svg |
45 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-4 | -1.004e+01 | 0.0004 | 27.0 | 3.20% | 642.2 | 1.34% | motif file (matrix) |
svg |
46 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-4 | -9.938e+00 | 0.0004 | 110.0 | 13.02% | 4284.8 | 8.92% | motif file (matrix) |
svg |
47 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.802e+00 | 0.0004 | 38.0 | 4.50% | 1072.7 | 2.23% | motif file (matrix) |
svg |
48 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.776e+00 | 0.0004 | 51.0 | 6.04% | 1609.2 | 3.35% | motif file (matrix) |
svg |
49 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -9.757e+00 | 0.0004 | 41.0 | 4.85% | 1195.3 | 2.49% | motif file (matrix) |
svg |
50 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-4 | -9.732e+00 | 0.0004 | 89.0 | 10.53% | 3313.2 | 6.90% | motif file (matrix) |
svg |
51 |
| ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -9.318e+00 | 0.0006 | 27.0 | 3.20% | 671.7 | 1.40% | motif file (matrix) |
svg |
52 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-4 | -9.292e+00 | 0.0006 | 22.0 | 2.60% | 492.1 | 1.02% | motif file (matrix) |
svg |
53 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.813e+00 | 0.0010 | 84.0 | 9.94% | 3169.8 | 6.60% | motif file (matrix) |
svg |
54 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -8.766e+00 | 0.0011 | 75.0 | 8.88% | 2755.6 | 5.74% | motif file (matrix) |
svg |
55 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.534e+00 | 0.0013 | 101.0 | 11.95% | 4007.5 | 8.34% | motif file (matrix) |
svg |
56 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.299e+00 | 0.0016 | 180.0 | 21.30% | 7994.7 | 16.64% | motif file (matrix) |
svg |
57 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.258e+00 | 0.0017 | 66.0 | 7.81% | 2388.1 | 4.97% | motif file (matrix) |
svg |
58 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.042e+00 | 0.0020 | 9.0 | 1.07% | 119.2 | 0.25% | motif file (matrix) |
svg |
59 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-3 | -7.531e+00 | 0.0033 | 35.0 | 4.14% | 1079.9 | 2.25% | motif file (matrix) |
svg |
60 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.478e+00 | 0.0034 | 65.0 | 7.69% | 2414.8 | 5.03% | motif file (matrix) |
svg |
61 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -7.254e+00 | 0.0042 | 82.0 | 9.70% | 3239.3 | 6.74% | motif file (matrix) |
svg |
62 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.244e+00 | 0.0042 | 190.0 | 22.49% | 8691.6 | 18.09% | motif file (matrix) |
svg |
63 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.178e+00 | 0.0044 | 46.0 | 5.44% | 1578.9 | 3.29% | motif file (matrix) |
svg |
64 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.120e+00 | 0.0046 | 33.0 | 3.91% | 1021.8 | 2.13% | motif file (matrix) |
svg |
65 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.951e+00 | 0.0054 | 7.0 | 0.83% | 86.1 | 0.18% | motif file (matrix) |
svg |
66 |
| GFY(?)/Promoter/Homer | 1e-3 | -6.947e+00 | 0.0054 | 10.0 | 1.18% | 168.2 | 0.35% | motif file (matrix) |
svg |
67 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -6.800e+00 | 0.0060 | 75.0 | 8.88% | 2956.0 | 6.15% | motif file (matrix) |
svg |
68 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.705e+00 | 0.0066 | 89.0 | 10.53% | 3643.2 | 7.58% | motif file (matrix) |
svg |
69 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -6.188e+00 | 0.0108 | 13.0 | 1.54% | 286.7 | 0.60% | motif file (matrix) |
svg |
70 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.177e+00 | 0.0108 | 6.0 | 0.71% | 73.7 | 0.15% | motif file (matrix) |
svg |
71 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -6.157e+00 | 0.0109 | 31.0 | 3.67% | 999.7 | 2.08% | motif file (matrix) |
svg |
72 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -6.055e+00 | 0.0119 | 10.0 | 1.18% | 190.6 | 0.40% | motif file (matrix) |
svg |
73 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.839e+00 | 0.0145 | 36.0 | 4.26% | 1240.8 | 2.58% | motif file (matrix) |
svg |
74 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.686e+00 | 0.0167 | 76.0 | 8.99% | 3137.9 | 6.53% | motif file (matrix) |
svg |
75 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.651e+00 | 0.0171 | 16.0 | 1.89% | 416.6 | 0.87% | motif file (matrix) |
svg |
76 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -5.506e+00 | 0.0195 | 222.0 | 26.27% | 10739.4 | 22.36% | motif file (matrix) |
svg |
77 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.475e+00 | 0.0198 | 51.0 | 6.04% | 1960.4 | 4.08% | motif file (matrix) |
svg |
78 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.437e+00 | 0.0203 | 188.0 | 22.25% | 8938.7 | 18.61% | motif file (matrix) |
svg |
79 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -5.433e+00 | 0.0203 | 35.0 | 4.14% | 1228.2 | 2.56% | motif file (matrix) |
svg |
80 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.416e+00 | 0.0203 | 27.0 | 3.20% | 878.5 | 1.83% | motif file (matrix) |
svg |
81 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.259e+00 | 0.0234 | 39.0 | 4.62% | 1424.3 | 2.97% | motif file (matrix) |
svg |
82 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.196e+00 | 0.0246 | 46.0 | 5.44% | 1754.8 | 3.65% | motif file (matrix) |
svg |
83 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.056e+00 | 0.0279 | 3.0 | 0.36% | 21.9 | 0.05% | motif file (matrix) |
svg |
84 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.948e+00 | 0.0307 | 80.0 | 9.47% | 3436.3 | 7.15% | motif file (matrix) |
svg |
85 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.942e+00 | 0.0307 | 75.0 | 8.88% | 3188.8 | 6.64% | motif file (matrix) |
svg |
86 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.922e+00 | 0.0308 | 34.0 | 4.02% | 1226.0 | 2.55% | motif file (matrix) |
svg |
87 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.849e+00 | 0.0328 | 18.0 | 2.13% | 535.8 | 1.12% | motif file (matrix) |
svg |
88 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-2 | -4.820e+00 | 0.0334 | 6.0 | 0.71% | 97.4 | 0.20% | motif file (matrix) |
svg |
89 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.776e+00 | 0.0345 | 95.0 | 11.24% | 4219.9 | 8.79% | motif file (matrix) |
svg |
90 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.687e+00 | 0.0373 | 39.0 | 4.62% | 1478.3 | 3.08% | motif file (matrix) |
svg |
91 |
| NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer | 1e-2 | -4.607e+00 | 0.0399 | 11.0 | 1.30% | 272.1 | 0.57% | motif file (matrix) |
svg |