Information for 14-GCCTTTTGAA (Motif 25)

A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A
Reverse Opposite:
A C G T A C G T T A G C G T C A C G T A C T G A C G T A A T C G C T A G A T G C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.833
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif148.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets47.8 +/- 24.7bp
Average Position of motif in Background50.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCCTTTTGAA--
---ATTTGAATT
 A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCCTTTTGAA----
----TTTGAAACCG
 A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTGAA--
--CCTTTGATGT
 A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTTTGAA---
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTTTTGAA---
-CCTTTTATAGNC
 A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTGAA--
--CCTTTGAWGT
 A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCTTTTGAA---
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTTGAA----
TGACCTTTTGACCTTT
 A C G T A C G T A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCTTTTGAA---
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTTGAA---
TGACCTTTTGACCTC
 A C G T A C G T A T C G A G T C A T G C C G A T A G C T A C G T A C G T A T C G T G C A G T C A A C G T A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C