Information for 17-CGCTCTSCGCGGS (Motif 22)

A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C G T A C A C T G A G T C A C T G A T C G C G T A A C T G C G T A A C T G A G T C C T A G
p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 26.7bp
Average Position of motif in Background73.6 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCTSCGCGGS
NNGCNCTGCGCGGC
 A C G T A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

CENPB/MA0637.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCTSCGCGGS
TTCGTNNNANGCGGG
 A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCTCTSCGCGGS
NGCTN--------
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGCTCTSCGCGGS
-GCTCCG------
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCTSCGCGGS------
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGCTCTSCGCGGS---
----BTKGGCGGGAAA
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCTCTSCGCGGS
---DCTCAGCAGG
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CGCTCTSCGCGGS----
------GGGCGGGAAGG
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CGCTCTSCGCGGS----
-------GGCGGGAAAH
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CGCTCTSCGCGGS---
-NCNCAGCGGGGGGTC
 A G T C A C T G A G T C A C G T A G T C A C G T A T G C G T A C A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C